PhytophthoraV1, Main, Exploration, bibRecord, 001751

Evidence for involvement of Dicer-like, Argonaute and histone deacetylase proteins in gene silencing in Phytophthora infestans.

Identifieur interne : 001751 ( Main/Exploration ); précédent : 001750; suivant : 001752

Evidence for involvement of Dicer-like, Argonaute and histone deacetylase proteins in gene silencing in Phytophthora infestans.

Auteurs : Ramesh R. Vetukuri [Suède] ; Anna O. Avrova ; Laura J. Grenville-Briggs ; Pieter Van West ; Fredrik Söderbom ; Eugene I. Savenkov ; Stephen C. Whisson ; Christina Dixelius

Source :

Molecular plant pathology [ 1364-3703 ] ; 2011.

RBID : pubmed:21726377

Descripteurs français

English descriptors

KwdEn :
- Argonaute Proteins (genetics), Argonaute Proteins (metabolism), Gene Silencing (MeSH), Histone Deacetylases (genetics), Histone Deacetylases (metabolism), Histone Methyltransferases (MeSH), Histone-Lysine N-Methyltransferase (genetics), Histone-Lysine N-Methyltransferase (metabolism), Lycopersicon esculentum (microbiology), Phylogeny (MeSH), Phytophthora infestans (genetics), Phytophthora infestans (metabolism), Plant Diseases (microbiology), RNA Interference (MeSH), RNA Replicase (genetics), RNA Replicase (metabolism), Reverse Transcriptase Polymerase Chain Reaction (MeSH), Solanum tuberosum (microbiology).
MESH :
- chemical , genetics : Argonaute Proteins, Histone Deacetylases, Histone-Lysine N-Methyltransferase, RNA Replicase.
- chemical , metabolism : Argonaute Proteins, Histone Deacetylases, Histone-Lysine N-Methyltransferase, RNA Replicase.
- genetics : Phytophthora infestans.
- metabolism : Phytophthora infestans.
- microbiology : Lycopersicon esculentum, Plant Diseases, Solanum tuberosum.
- Gene Silencing, Histone Methyltransferases, Phylogeny, RNA Interference, Reverse Transcriptase Polymerase Chain Reaction.

Abstract

Gene silencing may have a direct or indirect impact on many biological processes in eukaryotic cells, and is a useful tool for the determination of the roles of specific genes. In this article, we report silencing in Phytophthora infestans, an oomycete pathogen of potato and tomato. Gene silencing is known to occur in P. infestans, but its genetic basis has yet to be determined. Genes encoding the major components of the RNA interference (RNAi) pathway, Dicer-like (Pidcl1), Argonaute (Piago1-5) and RNA-directed RNA polymerase (Pirdr1), were identified in the P. infestans genome by comparative genomics, together with families of other genes potentially involved in gene silencing, such as histone deacetylases, histone methyltransferases, DEAD helicases, chromodomain proteins and a class 1 RNaseIII. Real-time reverse transcription-polymerase chain reaction demonstrated transcript accumulation for all candidate genes throughout the asexual lifecycle and plant infection, but at different levels of mRNA abundance. A functional assay was developed in which silencing of the sporulation-associated Picdc14 gene was released by the treatment of protoplasts with in vitro-synthesized double-stranded RNAs homologous to Pidcl1, Piago1/2 and histone deacetylase Pihda1. These results suggest that the components of gene silencing, namely Dicer-like, Argonaute and histone deacetylase, are functional in P. infestans. Our data demonstrate that this oomycete possesses canonical gene silencing pathways similar to those of other eukaryotes.

DOI: 10.1111/j.1364-3703.2011.00710.x
PubMed: 21726377
PubMed Central: PMC6640358

Affiliations:

Suède

Links toward previous steps (curation, corpus...)

to stream Main, to step Corpus: 001673
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Le document en format XML

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<term>Lycopersicon esculentum (microbiology)</term>
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<front><div type="abstract" xml:lang="en">Gene silencing may have a direct or indirect impact on many biological processes in eukaryotic cells, and is a useful tool for the determination of the roles of specific genes. In this article, we report silencing in Phytophthora infestans, an oomycete pathogen of potato and tomato. Gene silencing is known to occur in P. infestans, but its genetic basis has yet to be determined. Genes encoding the major components of the RNA interference (RNAi) pathway, Dicer-like (Pidcl1), Argonaute (Piago1-5) and RNA-directed RNA polymerase (Pirdr1), were identified in the P. infestans genome by comparative genomics, together with families of other genes potentially involved in gene silencing, such as histone deacetylases, histone methyltransferases, DEAD helicases, chromodomain proteins and a class 1 RNaseIII. Real-time reverse transcription-polymerase chain reaction demonstrated transcript accumulation for all candidate genes throughout the asexual lifecycle and plant infection, but at different levels of mRNA abundance. A functional assay was developed in which silencing of the sporulation-associated Picdc14 gene was released by the treatment of protoplasts with in vitro-synthesized double-stranded RNAs homologous to Pidcl1, Piago1/2 and histone deacetylase Pihda1. These results suggest that the components of gene silencing, namely Dicer-like, Argonaute and histone deacetylase, are functional in P. infestans. Our data demonstrate that this oomycete possesses canonical gene silencing pathways similar to those of other eukaryotes.</div>
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<Abstract><AbstractText>Gene silencing may have a direct or indirect impact on many biological processes in eukaryotic cells, and is a useful tool for the determination of the roles of specific genes. In this article, we report silencing in Phytophthora infestans, an oomycete pathogen of potato and tomato. Gene silencing is known to occur in P. infestans, but its genetic basis has yet to be determined. Genes encoding the major components of the RNA interference (RNAi) pathway, Dicer-like (Pidcl1), Argonaute (Piago1-5) and RNA-directed RNA polymerase (Pirdr1), were identified in the P. infestans genome by comparative genomics, together with families of other genes potentially involved in gene silencing, such as histone deacetylases, histone methyltransferases, DEAD helicases, chromodomain proteins and a class 1 RNaseIII. Real-time reverse transcription-polymerase chain reaction demonstrated transcript accumulation for all candidate genes throughout the asexual lifecycle and plant infection, but at different levels of mRNA abundance. A functional assay was developed in which silencing of the sporulation-associated Picdc14 gene was released by the treatment of protoplasts with in vitro-synthesized double-stranded RNAs homologous to Pidcl1, Piago1/2 and histone deacetylase Pihda1. These results suggest that the components of gene silencing, namely Dicer-like, Argonaute and histone deacetylase, are functional in P. infestans. Our data demonstrate that this oomycete possesses canonical gene silencing pathways similar to those of other eukaryotes.</AbstractText>
<CopyrightInformation>© 2011 THE AUTHORS. MOLECULAR PLANT PATHOLOGY © 2011 BSPP AND BLACKWELL PUBLISHING LTD.</CopyrightInformation>
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<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Vetukuri</LastName>
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Evidence for involvement of Dicer-like, Argonaute and histone deacetylase proteins in gene silencing in Phytophthora infestans.

Evidence for involvement of Dicer-like, Argonaute and histone deacetylase proteins in gene silencing in Phytophthora infestans.

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